Description : component *(SNAPC3/SRD2) of SNAP snRNA transcription factor complex
Gene families : OG_42_0007778 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007778_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Sorghum bicolor: Sobic.003G398700.1 | |
Cluster | HCAA Clusters: Cluster_182 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi2g58420 | No alias | snRNA activating complex family protein | 0.04 | Orthogroups_2024-Update | |
Brara.H01977.1 | No alias | component *(SNAPC3/SRD2) of SNAP snRNA transcription... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Predicted GO |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predicted GO |
MF | GO:0004057 | arginyltransferase activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Predicted GO |
BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Predicted GO |
BP | GO:0006401 | RNA catabolic process | IEP | Predicted GO |
BP | GO:0006402 | mRNA catabolic process | IEP | Predicted GO |
BP | GO:0006464 | cellular protein modification process | IEP | Predicted GO |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0006914 | autophagy | IEP | Predicted GO |
CC | GO:0008023 | transcription elongation factor complex | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016598 | protein arginylation | IEP | Predicted GO |
MF | GO:0016755 | transferase activity, transferring amino-acyl groups | IEP | Predicted GO |
BP | GO:0036211 | protein modification process | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Predicted GO |
CC | GO:0070449 | elongin complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022042 | snRNA-activating_su3 | 351 | 568 |
No external refs found! |