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  5. Sobic.003G398700.1

Sobic.003G398700.1


Description : component *(SNAPC3/SRD2) of SNAP snRNA transcription factor complex


Gene families : OG_42_0007778 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007778_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G398700.1
Cluster HCAA Clusters: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
Bradi2g58420 No alias snRNA activating complex family protein 0.04 Orthogroups_2024-Update
Brara.H01977.1 No alias component *(SNAPC3/SRD2) of SNAP snRNA transcription... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0004057 arginyltransferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016598 protein arginylation IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022042 snRNA-activating_su3 351 568
No external refs found!