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  5. Sobic.003G407100.1

Sobic.003G407100.1


Description : Unknown function


Gene families : OG_42_0000930 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000930_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G407100.1
Cluster HCAA Clusters: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Bradi2g59150 No alias CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein 0.03 Orthogroups_2024-Update
GRMZM2G171622 No alias CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein 0.02 Orthogroups_2024-Update
LOC_Os01g69900 No alias CBS domain-containing protein, putative, expressed 0.05 Orthogroups_2024-Update
Pp1s86_24V6 No alias cbs domain containing protein 0.02 Orthogroups_2024-Update
Seita.5G433000.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR000270 PB1_dom 415 496
IPR000644 CBS_dom 64 109
IPR000644 CBS_dom 232 278
IPR000644 CBS_dom 124 168
IPR000644 CBS_dom 292 337
No external refs found!