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  5. Sobic.003G408000.2

Sobic.003G408000.2


Description : component *(bL27c) of large plastid ribosomal-subunit proteome


Gene families : OG_42_0002035 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G408000.2
Cluster HCAA Clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
159042 No alias ribosomal protein large subunit 27 0.02 Orthogroups_2024-Update
A4A49_35915 No alias 50s ribosomal protein l27, chloroplastic 0.06 Orthogroups_2024-Update
Bradi2g59210 No alias ribosomal protein large subunit 27 0.06 Orthogroups_2024-Update
Cre06.g300800 No alias ribosomal protein large subunit 27 0.05 Orthogroups_2024-Update
Glyma.11G151300 No alias ribosomal protein large subunit 27 0.03 Orthogroups_2024-Update
HORVU3Hr1G095330.1 No alias component *(bL27c) of large plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Kfl00181_0180 kfl00181_0180_v1.1 (at2g16930 : 127.0) Ribosomal protein L27 family... 0.01 Orthogroups_2024-Update
Kfl00287_0170 kfl00287_0170_v1.1 (p30155|rk27_tobac : 140.0) 50S ribosomal protein L27,... 0.05 Orthogroups_2024-Update
LOC_Os01g69950 No alias ribosomal protein L27, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G329500 No alias ribosomal protein large subunit 27 0.06 Orthogroups_2024-Update
Pp1s167_18V6 No alias ribosomal protein l27 0.02 Orthogroups_2024-Update
Pp1s19_202V6 No alias ribosomal protein l27 0.03 Orthogroups_2024-Update
Seita.5G433600.1 No alias component *(bL27c) of large plastid ribosomal-subunit proteome 0.17 Orthogroups_2024-Update
Solyc11g068820 No alias 50S ribosomal protein L27 0.03 Orthogroups_2024-Update
Sopen11g027540 No alias Ribosomal L27 protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004312 fatty acid synthase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
MF GO:0009922 fatty acid elongase activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 107 186
No external refs found!