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Description : LD-type transcription factor & flowering time factor *(LD) & regulatory protein of RNA homeostasis
Gene families : OG_42_0004873 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004873_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor: Sobic.003G416700.1 | |
| Cluster | HCAA Clusters: Cluster_167 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At4g02560 | No alias | Homeobox protein LUMINIDEPENDENS... | 0.03 | Orthogroups_2024-Update | |
| Bradi2g59937 | No alias | Homeodomain-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.03G211500 | No alias | Homeodomain-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Kfl00089_0300 | kfl00089_0300_v1.1 | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
| MA_138436g0010 | No alias | (at4g02560 : 106.0) Encodes a nuclear localized protein... | 0.04 | Orthogroups_2024-Update | |
| Seita.5G442400.1 | No alias | LD-type transcription factor & flowering time factor... | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003729 | mRNA binding | IEP | Predicted GO |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005515 | protein binding | IEP | Predicted GO |
| CC | GO:0005685 | U1 snRNP | IEP | Predicted GO |
| BP | GO:0006376 | mRNA splice site selection | IEP | Predicted GO |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | Predicted GO |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Predicted GO |
| MF | GO:0019899 | enzyme binding | IEP | Predicted GO |
| MF | GO:0019902 | phosphatase binding | IEP | Predicted GO |
| MF | GO:0019903 | protein phosphatase binding | IEP | Predicted GO |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predicted GO |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Predicted GO |
| BP | GO:0031399 | regulation of protein modification process | IEP | Predicted GO |
| BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | Predicted GO |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | Predicted GO |
| BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | Predicted GO |
| MF | GO:0044877 | protein-containing complex binding | IEP | Predicted GO |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Predicted GO |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Predicted GO |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Predicted GO |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | Predicted GO |
| BP | GO:0065009 | regulation of molecular function | IEP | Predicted GO |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Predicted GO |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predicted GO |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Predicted GO |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |