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  5. Sobic.003G422600.1

Sobic.003G422600.1


Description : gamma-aminobutyric acid transporter *(GABP)


Gene families : OG_42_0001460 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001460_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G422600.1
Cluster HCAA Clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Bradi2g43062 No alias bidirectional amino acid transporter 1 0.06 Orthogroups_2024-Update
Bradi2g60580 No alias bidirectional amino acid transporter 1 0.02 Orthogroups_2024-Update
GRMZM2G030814 No alias bidirectional amino acid transporter 1 0.03 Orthogroups_2024-Update
GRMZM2G158625 No alias bidirectional amino acid transporter 1 0.03 Orthogroups_2024-Update
Glyma.10G269700 No alias bidirectional amino acid transporter 1 0.03 Orthogroups_2024-Update
HORVU3Hr1G105870.5 No alias gamma-aminobutyric acid transporter *(GABP) 0.03 Orthogroups_2024-Update
PSME_00048661-RA No alias (at2g01170 : 395.0) Encodes a bidirectional amino acid... 0.02 Orthogroups_2024-Update
Potri.010G119100 No alias bidirectional amino acid transporter 1 0.03 Orthogroups_2024-Update
Seita.5G219700.1 No alias gamma-aminobutyric acid transporter *(GABP) 0.03 Orthogroups_2024-Update
Seita.5G449100.1 No alias gamma-aminobutyric acid transporter *(GABP) 0.04 Orthogroups_2024-Update
Seita.5G449400.1 No alias gamma-aminobutyric acid transporter *(GABP) 0.03 Orthogroups_2024-Update
Seita.5G449500.1 No alias gamma-aminobutyric acid transporter *(GABP) 0.05 Orthogroups_2024-Update
Seita.8G021800.1 No alias gamma-aminobutyric acid transporter *(GABP) 0.02 Orthogroups_2024-Update
Sobic.003G214400.1 No alias gamma-aminobutyric acid transporter *(GABP) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0022857 transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 34 490
No external refs found!