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  5. Sobic.003G424200.1

Sobic.003G424200.1


Description : Unknown function


Gene families : OG_42_0002057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G424200.1
Cluster HCAA Clusters: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Bradi2g60740 No alias SEC14 cytosolic factor family protein / phosphoglyceride... 0.03 Orthogroups_2024-Update
GRMZM2G369652 No alias SEC14 cytosolic factor family protein / phosphoglyceride... 0.04 Orthogroups_2024-Update
Kfl00012_0410 kfl00012_0410_v1.1 (at4g35750 : 132.0) SEC14 cytosolic factor family... 0.02 Orthogroups_2024-Update
PSME_00025086-RA No alias (at3g10210 : 233.0) SEC14 cytosolic factor family... 0.03 Orthogroups_2024-Update
Solyc02g083250 No alias Ganglioside-induced differentiation-associated protein 2... 0.02 Orthogroups_2024-Update
Solyc04g082050 No alias Ganglioside-induced differentiation-associated protein 2... 0.03 Orthogroups_2024-Update
Sopen04g009930 No alias Divergent CRAL/TRIO domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 70 205
No external refs found!