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  5. Sobic.003G424950.1

Sobic.003G424950.1


Description : transcriptional co-activator *(BOP)


Gene families : OG_42_0002464 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002464_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G424950.1
Cluster HCAA Clusters: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
At2g41370 No alias Regulatory protein NPR5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVC2] 0.03 Orthogroups_2024-Update
Brara.E00218.1 No alias transcriptional co-activator *(BOP) 0.02 Orthogroups_2024-Update
Pp1s28_209V6 No alias bop npr1 nim1-like regulatory protein 0.02 Orthogroups_2024-Update
Seita.5G451100.1 No alias transcriptional co-activator *(BOP) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR024228 NPR_central_dom 219 253
IPR002110 Ankyrin_rpt 290 372
IPR000210 BTB/POZ_dom 21 58
No external refs found!