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  5. Sobic.003G428700.2

Sobic.003G428700.2


Description : Unknown function


Gene families : OG_42_0001181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G428700.2
Cluster HCAA Clusters: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
Bradi1g62080 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi2g26817 No alias Function unknown 0.02 Orthogroups_2024-Update
Brara.B00454.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G057506 No alias Function unknown 0.05 Orthogroups_2024-Update
Glyma.08G301500 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.08G301600 No alias Function unknown 0.02 Orthogroups_2024-Update
HORVU2Hr1G022800.1 No alias Unknown function 0.08 Orthogroups_2024-Update
LOC_Os01g72360 No alias expressed protein 0.04 Orthogroups_2024-Update
MA_10381881g0010 No alias (at1g28190 : 100.0) unknown protein; BEST Arabidopsis... 0.04 Orthogroups_2024-Update
MA_218732g0010 No alias (at1g28190 : 109.0) unknown protein; BEST Arabidopsis... 0.08 Orthogroups_2024-Update
MA_593637g0010 No alias (at1g28190 : 92.8) unknown protein; BEST Arabidopsis... 0.04 Orthogroups_2024-Update
Potri.001G070700 No alias Function unknown 0.03 Orthogroups_2024-Update
Seita.3G260000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.9G399800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G403300.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004834 tryptophan synthase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 1 218
No external refs found!