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  5. Sobic.003G433000.1

Sobic.003G433000.1


Description : Unknown function


Gene families : OG_42_0000097 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000097_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G433000.1
Cluster HCAA Clusters: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
403921 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
77440 No alias GDSL-like Lipase/Acylhydrolase family protein 0.02 Orthogroups_2024-Update
At4g16230 No alias GDSL-like Lipase/Acylhydrolase superfamily protein... 0.02 Orthogroups_2024-Update
At5g15720 No alias GDSL esterase/lipase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFJ9] 0.02 Orthogroups_2024-Update
At5g41890 No alias GDSL-like Lipase/Acylhydrolase superfamily protein... 0.03 Orthogroups_2024-Update
Bradi1g30034 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g48760 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g49781 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g39622 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G062577 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G287400 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G076660.4 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os05g44200 No alias GDSL-like lipase/acylhydrolase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g17570 No alias GDSL-like lipase/acylhydrolase, putative, expressed 0.03 Orthogroups_2024-Update
MA_86938g0010 No alias (at5g15720 : 260.0) Contains lipase signature motif and... 0.03 Orthogroups_2024-Update
PSME_00006549-RA No alias (at5g15720 : 184.0) Contains lipase signature motif and... 0.02 Orthogroups_2024-Update
PSME_00033443-RA No alias (at2g23540 : 394.0) GDSL-like Lipase/Acylhydrolase... 0.03 Orthogroups_2024-Update
PSME_00035423-RA No alias (at2g23540 : 420.0) GDSL-like Lipase/Acylhydrolase... 0.03 Orthogroups_2024-Update
PSME_00037279-RA No alias (at5g15720 : 226.0) Contains lipase signature motif and... 0.02 Orthogroups_2024-Update
Potri.008G104650 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G088800 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
Pp1s7_65V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Seita.4G166400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G166500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G077800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G141300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc02g071710 No alias Lipase, GDSL (AHRD V3.3 *** A0A124S9Z4_CYNCS) 0.03 Orthogroups_2024-Update
Solyc06g064820 No alias GDSL esterase/lipase (AHRD V3.3 *** W9S0Q7_9ROSA) 0.03 Orthogroups_2024-Update
Sopen06g023330 No alias GDSL-like Lipase/Acylhydrolase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001087 GDSL 16 338
No external refs found!