Sobic.003G442100.1

Description : subgroup ERF-III transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.003G442100.1
Cluster	HCAA Clusters: Cluster_275

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03629	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
A4A49_16905	No alias	ethylene-responsive transcription factor 5	0.03	Orthogroups_2024-Update
A4A49_20188	No alias	ethylene-responsive transcription factor erf062	0.03	Orthogroups_2024-Update
A4A49_21042	No alias	ethylene-responsive transcription factor 4	0.02	Orthogroups_2024-Update
A4A49_28100	No alias	ethylene-responsive transcription factor erf017	0.03	Orthogroups_2024-Update
A4A49_33000	No alias	ethylene-responsive transcription factor 14	0.03	Orthogroups_2024-Update
A4A49_36078	No alias	ethylene-responsive transcription factor 5	0.03	Orthogroups_2024-Update
A4A49_36835	No alias	ethylene-responsive transcription factor 5	0.02	Orthogroups_2024-Update
AC209257.4_FG006	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
At1g12610	No alias	Dehydration-responsive element-binding protein 1F...	0.02	Orthogroups_2024-Update
At4g34410	No alias	Ethylene-responsive transcription factor ERF109...	0.02	Orthogroups_2024-Update
At5g25190	No alias	Ethylene-responsive transcription factor ERF003...	0.02	Orthogroups_2024-Update
At5g61590	No alias	Ethylene-responsive transcription factor ERF107...	0.02	Orthogroups_2024-Update
Bradi3g08790	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi3g24000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi5g08380	No alias	related to AP2 6l	0.01	Orthogroups_2024-Update
Brara.A03436.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.01	Orthogroups_2024-Update
Brara.B00844.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.02	Orthogroups_2024-Update
Brara.C01398.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Brara.D02449.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
Brara.D02719.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Brara.F01050.1	No alias	cutin and suberin biosynthesis transcription factor...	0.03	Orthogroups_2024-Update
Brara.F03559.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.H02645.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Brara.I01326.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G057386	No alias	ethylene responsive element binding factor 5	0.03	Orthogroups_2024-Update
GRMZM2G068967	No alias	ethylene response factor 7	0.02	Orthogroups_2024-Update
GRMZM5G837876	No alias	ethylene-responsive element binding factor 15	0.02	Orthogroups_2024-Update
Glyma.03G017300	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Glyma.03G255500	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.07G114000	No alias	ethylene-responsive element binding factor 13	0.02	Orthogroups_2024-Update
Glyma.16G040000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.19G164100	No alias	ethylene response factor 1	0.01	Orthogroups_2024-Update
HORVU1Hr1G058940.3	No alias	transcription factor component *(HRE/RAP2.12) of...	0.03	Orthogroups_2024-Update
HORVU1Hr1G067110.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
HORVU2Hr1G077180.2	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
HORVU5Hr1G080420.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os01g10370	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os01g54890	No alias	ethylene-responsive transcription factor 2, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os02g34260	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os02g43820	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os02g43970	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g22170	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g27930	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g08340	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g11860	No alias	ethylene-responsive transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g40150	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g44960	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g28440	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g39810	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_10432141g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_10433310g0010	No alias	(at5g11590 : 108.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_10435354g0010	No alias	(at1g19210 : 88.6) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_184464g0010	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
MA_18454g0020	No alias	(q9sxs8\|erf3_tobac : 96.3) Ethylene-responsive...	0.03	Orthogroups_2024-Update
MA_203191g0010	No alias	(at1g28360 : 85.9) encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
MA_3405g0010	No alias	(q40476\|erf1_tobac : 120.0) Ethylene-responsive...	0.03	Orthogroups_2024-Update
MA_5629699g0010	No alias	(at5g21960 : 89.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_81029g0010	No alias	(q9sxs8\|erf3_tobac : 95.1) Ethylene-responsive...	0.03	Orthogroups_2024-Update
MA_922309g0010	No alias	(at4g17500 : 92.0) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
MA_9294379g0010	No alias	(at5g11590 : 120.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_97319g0010	No alias	(at3g16280 : 127.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00005187-RA	No alias	(at4g17500 : 144.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00014384-RA	No alias	(at5g21960 : 93.6) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00048384-RA	No alias	(at5g11190 : 113.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00051454-RA	No alias	(at1g19210 : 98.6) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00051455-RA	No alias	(at5g21960 : 102.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
PSME_00052064-RA	No alias	(at5g21960 : 132.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
Potri.003G050700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.003G121200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.008G091300	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Potri.014G099900	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Pp1s1_34V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s340_16V6	No alias	ethylene-responsive transcription	0.02	Orthogroups_2024-Update
Pp1s38_257V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G174100.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Seita.1G188000.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.2G156200.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Seita.2G230500.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Seita.2G280400.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.2G430400.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.04	Orthogroups_2024-Update
Seita.3G139200.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Seita.3G145700.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Seita.4G039700.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.4G180800.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Seita.5G141600.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Seita.6G023800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.7G290600.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G296300.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.001G473900.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Sobic.001G502300.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G100500.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G296900.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G319700.1	No alias	Unknown function	0.01	Orthogroups_2024-Update
Sobic.005G103100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.006G168200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.006G259000.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Sobic.008G050600.2	No alias	subgroup ERF-X transcription factor	0.04	Orthogroups_2024-Update
Sobic.009G151600.2	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Sobic.009G170800.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
Sobic.009G238500.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Solyc01g095500	No alias	Sl Cytokinin Response Factor 5	0.03	Orthogroups_2024-Update
Solyc05g052030	No alias	ethylene response factor 4	0.02	Orthogroups_2024-Update
Solyc10g076370	No alias	Dehydration-responsive element binding protein (AHRD...	0.02	Orthogroups_2024-Update
Solyc12g009240	No alias	Ethylene-responsive transcription factor ERF017 (AHRD...	0.02	Orthogroups_2024-Update
Sopen00g003270	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen02g033000	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen08g026910	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0010181	FMN binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	44	95

External Links

No external refs found!

Sobic.003G442100.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation