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  5. Sobic.003G444900.1

Sobic.003G444900.1


Description : E3 ubiquitin ligase *(XBAT3)


Gene families : OG_42_0001761 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001761_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G444900.1
Cluster HCAA Clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G116350.2 No alias E3 ubiquitin ligase *(XBAT3) 0.03 Orthogroups_2024-Update
HORVU4Hr1G059710.8 No alias E3 ubiquitin ligase *(XBAT3) 0.03 Orthogroups_2024-Update
Potri.009G030000 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.02 Orthogroups_2024-Update
Seita.3G064300.1 No alias E3 ubiquitin ligase *(XBAT3) 0.03 Orthogroups_2024-Update
Sopen11g025760 No alias Ankyrin repeats (3 copies) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 205 235
IPR002110 Ankyrin_rpt 124 192
IPR002110 Ankyrin_rpt 18 119
No external refs found!