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  5. Sobic.003G445800.1

Sobic.003G445800.1


Description : transcription factor *(A/B-GATA)


Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G445800.1
Cluster HCAA Clusters: Cluster_337

Target Alias Description ECC score Gene Family Method Actions
405209 No alias GATA transcription factor 20 0.03 Orthogroups_2024-Update
GRMZM2G009530 No alias GATA transcription factor 12 0.02 Orthogroups_2024-Update
Glyma.20G180100 No alias GATA transcription factor 9 0.03 Orthogroups_2024-Update
Pp1s241_14V6 No alias hypothetical protein similar to Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Seita.3G397100.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0043565 sequence-specific DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000679 Znf_GATA 41 75
No external refs found!