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  5. Sobic.004G004800.1

Sobic.004G004800.1


Description : vacuolar acid beta-fructofuranosidase *(VIN) & EC_3.2 glycosylase


Gene families : OG_42_0000217 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G004800.1
Cluster HCAA Clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
A4A49_13751 No alias acid beta-fructofuranosidase 0.03 Orthogroups_2024-Update
A4A49_24251 No alias acid beta-fructofuranosidase aiv-18 0.02 Orthogroups_2024-Update
Bradi2g61830 No alias Glycosyl hydrolases family 32 protein 0.02 Orthogroups_2024-Update
Bradi3g00910 No alias Glycosyl hydrolases family 32 protein 0.04 Orthogroups_2024-Update
Bradi5g25270 No alias beta-fructofuranosidase 5 0.03 Orthogroups_2024-Update
Brara.I05129.1 No alias vacuolar acid beta-fructofuranosidase *(VIN) & EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
GRMZM2G095725 No alias cell wall invertase 2 0.03 Orthogroups_2024-Update
Glyma.13G349300 No alias Glycosyl hydrolases family 32 protein 0.02 Orthogroups_2024-Update
Pp1s405_3V6 No alias acid invertase 0.02 Orthogroups_2024-Update
Sobic.006G255500.1 No alias cell wall acid beta-fructofuranosidase *(CWIN) & EC_3.2... 0.02 Orthogroups_2024-Update
Solyc10g085640 No alias Cell-wall invertase (AHRD V3.3 *** Q8LRN8_SOLLC) 0.02 Orthogroups_2024-Update
Solyc10g085650 No alias Cell-wall invertase (AHRD V3.3 *** Q8LRN9_SOLLC) 0.04 Orthogroups_2024-Update
Sopen10g035060 No alias Glycosyl hydrolases family 32 N-terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004564 beta-fructofuranosidase activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR021792 Beta-fructofuranosidase 13 122
IPR013189 Glyco_hydro_32_C 467 655
IPR013148 Glyco_hydro_32_N 130 464
No external refs found!