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  5. Sobic.004G007900.1

Sobic.004G007900.1


Description : DNA helicase *(MOM1)


Gene families : OG_42_0004199 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004199_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G007900.1
Cluster HCAA Clusters: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
Bradi4g07717 No alias ATP-dependent helicase family protein 0.05 Orthogroups_2024-Update
Glyma.13G324500 No alias ATP-dependent helicase family protein 0.04 Orthogroups_2024-Update
Seita.4G001500.1 No alias DNA helicase *(MOM1) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000330 SNF2_N 193 367
No external refs found!