Sobic.004G008900.1

Description : sphingobase hydroxylase & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen

Gene families : OG_42_0001180 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001180_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.004G008900.1
Cluster	HCAA Clusters: Cluster_49

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os06g12250	No alias	sphingolipid C4-hydroxylase SUR2, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g22490	No alias	sphingolipid C4-hydroxylase SUR2, putative, expressed	0.03	Orthogroups_2024-Update
Sobic.003G286600.1	No alias	sphingobase hydroxylase & EC_1.14 oxidoreductase acting...	0.03	Orthogroups_2024-Update
Sobic.004G008200.2	No alias	sphingobase hydroxylase & EC_1.14 oxidoreductase acting...	0.04	Orthogroups_2024-Update
Sobic.004G008800.1	No alias	sphingobase hydroxylase & EC_1.14 oxidoreductase acting...	0.05	Orthogroups_2024-Update
Sobic.004G237600.1	No alias	sphingobase hydroxylase & EC_1.14 oxidoreductase acting...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	IEA	16Dec
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	IEA	16Dec
BP	GO:0009058	biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	16Dec
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006082	organic acid metabolic process	IEP	Predicted GO
BP	GO:0006631	fatty acid metabolic process	IEP	Predicted GO
BP	GO:0009690	cytokinin metabolic process	IEP	Predicted GO
BP	GO:0010817	regulation of hormone levels	IEP	Predicted GO
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Predicted GO
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	Predicted GO
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0034754	cellular hormone metabolic process	IEP	Predicted GO
BP	GO:0042255	ribosome assembly	IEP	Predicted GO
BP	GO:0042256	mature ribosome assembly	IEP	Predicted GO
BP	GO:0042445	hormone metabolic process	IEP	Predicted GO
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Predicted GO
MF	GO:0043022	ribosome binding	IEP	Predicted GO
BP	GO:0043436	oxoacid metabolic process	IEP	Predicted GO
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Predicted GO
BP	GO:0070925	organelle assembly	IEP	Predicted GO
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006694	Fatty_acid_hydroxylase	103	238

External Links

No external refs found!