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  5. Sobic.004G011201.1

Sobic.004G011201.1


Description : Unknown function


Gene families : OG_42_0006779 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006779_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G011201.1
Cluster HCAA Clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
409247 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
At5g23730 No alias WD repeat-containing protein RUP2... 0.04 Orthogroups_2024-Update
Brara.I00603.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Cre01.g053850 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G008200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Mp2g18040.1 No alias protein kinase (PEK) 0.02 Orthogroups_2024-Update
Pp1s22_112V6 No alias ubiquitin ligase protein 0.03 Orthogroups_2024-Update
Pp1s347_35V6 No alias cop1 regulatory protein 0.05 Orthogroups_2024-Update
Seita.1G117200.1 No alias Unknown function 0.09 Orthogroups_2024-Update
Solyc11g005190 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.05 Orthogroups_2024-Update
Sopen11g001190 No alias WD domain, G-beta repeat 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 85 118
IPR001680 WD40_repeat 190 220
No external refs found!