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  5. Sobic.004G017800.1

Sobic.004G017800.1


Description : E2 MUB ubiquitin-conjugating enzyme


Gene families : OG_42_0000236 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G017800.1
Cluster HCAA Clusters: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
Bradi2g45550 No alias ubiquitin conjugating enzyme 9 0.03 Orthogroups_2024-Update
Brara.A01770.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
Brara.B01288.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.02 Orthogroups_2024-Update
Brara.C04161.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
Brara.G00309.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
GRMZM5G814314 No alias ubiquitin conjugating enzyme 9 0.05 Orthogroups_2024-Update
Seita.3G203000.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
Sobic.003G337000.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
Solyc01g095490 No alias Ubiquitin-conjugating enzyme E2, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc05g050230 No alias Ubiquitin conjugating enzyme E2 (AHRD V3.3 *** A5YVL3_ADICA) 0.04 Orthogroups_2024-Update
Sopen05g028680 No alias Ubiquitin-conjugating enzyme 0.04 Orthogroups_2024-Update
Sopen08g030240 No alias Ubiquitin-conjugating enzyme 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 139
No external refs found!