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  5. Sobic.004G018400.1

Sobic.004G018400.1


Description : peptidyl-prolyl cis-trans isomerase *(ROC1/2/3) & EC_5.2 cis-trans-isomerase


Gene families : OG_42_0000307 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000307_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G018400.1
Cluster HCAA Clusters: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
229229 No alias cyclophilin 20-2 0.03 Orthogroups_2024-Update
A4A49_27145 No alias peptidyl-prolyl cis-trans isomerase cyp19-3 0.04 Orthogroups_2024-Update
At5g13120 No alias Peptidyl-prolyl cis-trans isomerase... 0.03 Orthogroups_2024-Update
GRMZM2G326111 No alias Cyclophilin-like peptidyl-prolyl cis-trans isomerase... 0.03 Orthogroups_2024-Update
PSME_00003479-RA No alias (at3g63400 : 242.0) Cyclophilin-like peptidyl-prolyl... 0.02 Orthogroups_2024-Update
Potri.T051300 No alias rotamase cyclophilin 2 0.03 Orthogroups_2024-Update
Pp1s249_62V6 No alias peptidyl-prolyl cis-trans isomerase 0.02 Orthogroups_2024-Update
Seita.1G109300.1 No alias EC_5.2 cis-trans-isomerase 0.03 Orthogroups_2024-Update
Seita.1G177500.1 No alias peptidyl-prolyl cis-trans isomerase *(ROC1/2/3) & EC_5.2... 0.11 Orthogroups_2024-Update
Solyc08g067090 No alias cyclophilin-like protein 0.03 Orthogroups_2024-Update
Solyc11g006070 No alias Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** M1CSR8_SOLTU) 0.02 Orthogroups_2024-Update
Sopen11g002010 No alias Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA 16Dec
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 7 169
No external refs found!