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  5. Sobic.004G019100.1

Sobic.004G019100.1


Description : EC_4.2 carbon-oxygen lyase & mono-/sesquiterpene-/diterpene synthase


Gene families : OG_42_0003460 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003460_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G019100.1
Cluster HCAA Clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
A4A49_00838 No alias (3s,6e)-nerolidol synthase 1, chloroplastic 0.03 Orthogroups_2024-Update
At1g61680 No alias S-(+)-linalool synthase, chloroplastic... 0.03 Orthogroups_2024-Update
Glyma.13G250400 No alias terpene synthase 14 0.05 Orthogroups_2024-Update
Potri.004G030200 No alias terpene synthase 14 0.03 Orthogroups_2024-Update
Solyc10g005410 No alias Terpene synthase (AHRD V3.3 *** G5CV41_SOLLC) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA 16Dec
MF GO:0010333 terpene synthase activity IEA 16Dec
MF GO:0016829 lyase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 240 503
IPR001906 Terpene_synth_N 63 208
No external refs found!