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  5. Sobic.004G021400.1

Sobic.004G021400.1


Description : Unknown function


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G021400.1
Cluster HCAA Clusters: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
A4A49_10919 No alias endoglucanase 5 0.03 Orthogroups_2024-Update
A4A49_19880 No alias endoglucanase 8 0.05 Orthogroups_2024-Update
At1g23210 No alias Endoglucanase 4 [Source:UniProtKB/Swiss-Prot;Acc:O49296] 0.03 Orthogroups_2024-Update
At1g48930 No alias Endoglucanase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M995] 0.03 Orthogroups_2024-Update
At2g44560 No alias Endoglucanase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8Q4] 0.04 Orthogroups_2024-Update
At4g38990 No alias Endoglucanase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVJ4] 0.04 Orthogroups_2024-Update
At4g39000 No alias Endoglucanase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY58] 0.02 Orthogroups_2024-Update
Bradi1g54580 No alias cellulase 2 0.03 Orthogroups_2024-Update
Brara.E01094.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.E01714.1 No alias class-C endo-1,4-beta-glucanase 0.04 Orthogroups_2024-Update
Brara.F03887.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I01325.1 No alias class-C endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update
Brara.I03254.1 No alias class-B endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update
Brara.I05558.1 No alias class-B endo-1,4-beta-glucanase 0.04 Orthogroups_2024-Update
GRMZM2G154678 No alias glycosyl hydrolase 9B8 0.04 Orthogroups_2024-Update
Glyma.05G236400 No alias glycosyl hydrolase 9B1 0.04 Orthogroups_2024-Update
Glyma.06G323100 No alias cellulase 3 0.03 Orthogroups_2024-Update
Glyma.12G027200 No alias glycosyl hydrolase 9C1 0.03 Orthogroups_2024-Update
Glyma.14G019900 No alias glycosyl hydrolase 9B8 0.02 Orthogroups_2024-Update
LOC_Os02g53820 No alias endoglucanase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g23084 No alias endoglucanase, putative, expressed 0.03 Orthogroups_2024-Update
MA_195523g0010 No alias (at3g43860 : 298.0) glycosyl hydrolase 9A4 (GH9A4);... 0.02 Orthogroups_2024-Update
PSME_00006676-RA No alias (at4g02290 : 363.0) glycosyl hydrolase 9B13 (GH9B13);... 0.02 Orthogroups_2024-Update
PSME_00009215-RA No alias (at1g02800 : 490.0) Encodes a protein with similarity to... 0.03 Orthogroups_2024-Update
PSME_00036164-RA No alias (at1g48930 : 712.0) glycosyl hydrolase 9C1 (GH9C1);... 0.02 Orthogroups_2024-Update
Potri.001G092200 No alias glycosyl hydrolase 9C2 0.02 Orthogroups_2024-Update
Potri.001G098800 No alias glycosyl hydrolase 9B14 0.04 Orthogroups_2024-Update
Potri.006G219700 No alias glycosyl hydrolase 9A4 0.03 Orthogroups_2024-Update
Pp1s100_139V6 No alias endo-beta- -glucanase 0.02 Orthogroups_2024-Update
Seita.1G086900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G148500.1 No alias class-B endo-1,4-beta-glucanase 0.04 Orthogroups_2024-Update
Sobic.004G244600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.006G090900.1 No alias class-B endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update
Sobic.010G101900.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g110340 No alias Endoglucanase (AHRD V3.3 *** M0ZU30_SOLTU) 0.03 Orthogroups_2024-Update
Solyc09g010210 No alias endo-1,4-beta-glucanase precursor (Cel2) 0.02 Orthogroups_2024-Update
Solyc11g040340 No alias LEE14BDGL L.esculentum endo-1,4-beta-D-glucanase 0.03 Orthogroups_2024-Update
Sopen08g031400 No alias Glycosyl hydrolase family 9 0.02 Orthogroups_2024-Update
Sopen09g004950 No alias Glycosyl hydrolase family 9 0.02 Orthogroups_2024-Update
Sopen09g030130 No alias Glycosyl hydrolase family 9 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 38 505
No external refs found!