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  5. Sobic.004G023400.1

Sobic.004G023400.1


Description : protein involved in PS-II assembly *(LPA2)


Gene families : OG_42_0008874 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008874_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G023400.1
Cluster HCAA Clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
A4A49_31326 No alias protein low psii accumulation 2, chloroplastic 0.03 Orthogroups_2024-Update
Glyma.09G232600 No alias low psii accumulation2 0.04 Orthogroups_2024-Update
Solyc03g083570 No alias low psii accumulation2 (AHRD V3.3 *** AT5G51545.1) 0.03 Orthogroups_2024-Update
Sopen03g023380 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!