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  5. Sobic.004G023500.1

Sobic.004G023500.1


Description : transcription factor *(A/B-GATA)


Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G023500.1
Cluster HCAA Clusters: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
At4g36620 No alias GATA transcription factor 19... 0.02 Orthogroups_2024-Update
Brara.C04334.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Brara.K00334.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
MA_103421g0030 No alias (at5g66320 : 154.0) Encodes GATA transcription factor... 0.02 Orthogroups_2024-Update
PSME_00026073-RA No alias (at5g66320 : 163.0) Encodes GATA transcription factor... 0.03 Orthogroups_2024-Update
Pp1s241_7V6 No alias F26P21.10; zinc finger (GATA type) family protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0043565 sequence-specific DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0030126 COPI vesicle coat IEP Predicted GO
InterPro domains Description Start Stop
IPR000679 Znf_GATA 199 232
No external refs found!