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  5. Sobic.004G042700.1

Sobic.004G042700.1


Description : Unknown function


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G042700.1
Cluster HCAA Clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
99802 No alias glycosyl hydrolase 9C2 0.04 Orthogroups_2024-Update
A4A49_18847 No alias endoglucanase 6 0.02 Orthogroups_2024-Update
AC203408.4_FG003 No alias glycosyl hydrolase 9B10 0.02 Orthogroups_2024-Update
At1g23210 No alias Endoglucanase 4 [Source:UniProtKB/Swiss-Prot;Acc:O49296] 0.03 Orthogroups_2024-Update
Bradi3g59810 No alias glycosyl hydrolase 9B8 0.03 Orthogroups_2024-Update
Brara.A00023.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G343144 No alias glycosyl hydrolase 9C1 0.03 Orthogroups_2024-Update
Glyma.03G216100 No alias glycosyl hydrolase 9B13 0.02 Orthogroups_2024-Update
Glyma.10G017000 No alias glycosyl hydrolase 9B13 0.02 Orthogroups_2024-Update
Glyma.11G101300 No alias glycosyl hydrolase 9C1 0.05 Orthogroups_2024-Update
LOC_Os02g50040 No alias endoglucanase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g13830 No alias endoglucanase, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os08g32940 No alias endoglucanase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10437098g0010 No alias (at4g11050 : 708.0) glycosyl hydrolase 9C3 (GH9C3);... 0.04 Orthogroups_2024-Update
MA_128094g0010 No alias (at1g02800 : 545.0) Encodes a protein with similarity to... 0.02 Orthogroups_2024-Update
MA_697188g0010 No alias (at4g02290 : 427.0) glycosyl hydrolase 9B13 (GH9B13);... 0.02 Orthogroups_2024-Update
PSME_00018616-RA No alias (q69sg5|gun24_orysa : 617.0) Endoglucanase 24 precursor... 0.03 Orthogroups_2024-Update
Potri.002G023900 No alias glycosyl hydrolase 9B5 0.02 Orthogroups_2024-Update
Pp1s100_139V6 No alias endo-beta- -glucanase 0.02 Orthogroups_2024-Update
Pp1s176_127V6 No alias endo-beta- -glucanase 0.06 Orthogroups_2024-Update
Seita.6G151600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen08g030520 No alias Glycosyl hydrolase family 9 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 35 513
No external refs found!