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  5. Sobic.004G045000.1

Sobic.004G045000.1


Description : Unknown function


Gene families : OG_42_0000266 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G045000.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Bradi3g04217 No alias Leucine-rich receptor-like protein kinase family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G023740.3 No alias LRR-Xb protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
LOC_Os02g06200 No alias phytosulfokine receptor precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g41890 No alias phytosulfokine receptor precursor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os04g57630 No alias phytosulfokine receptor precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_106360g0010 No alias (at1g34420 : 227.0) leucine-rich repeat transmembrane... 0.02 Orthogroups_2024-Update
Mp8g09600.1 No alias no description available(sp|q8rx63|rlp31_arath : 81.3) 0.02 Orthogroups_2024-Update
Potri.001G161000 No alias Leucine-rich receptor-like protein kinase family protein 0.03 Orthogroups_2024-Update
Seita.1G084900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G045200.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 40 74
IPR001611 Leu-rich_rpt 322 383
IPR001611 Leu-rich_rpt 251 309
IPR001611 Leu-rich_rpt 177 198
IPR001611 Leu-rich_rpt 103 118
IPR001611 Leu-rich_rpt 601 623
No external refs found!