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  5. Sobic.004G049900.1

Sobic.004G049900.1


Description : UBQ ubiquitin-fold protein


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G049900.1
Cluster HCAA Clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
271198 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
A4A49_13911 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Bradi1g32460 No alias polyubiquitin 10 0.05 Orthogroups_2024-Update
Bradi3g03957 No alias polyubiquitin 3 0.04 Orthogroups_2024-Update
Bradi3g04730 No alias polyubiquitin 10 0.04 Orthogroups_2024-Update
Brara.F02025.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.10G051100 No alias ubiquitin 4 0.03 Orthogroups_2024-Update
HORVU6Hr1G020140.6 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
MA_13121g0010 No alias (at5g03240 : 264.0) encodes ubiquitin that is attached... 0.02 Orthogroups_2024-Update
Mp6g03960.1 No alias ubiquitin-fold protein (UBQ) 0.02 Orthogroups_2024-Update
Pp1s175_73V6 No alias polyubiquitin 0.02 Orthogroups_2024-Update
Pp1s351_6V6 No alias polyubiquitin containing 7 ubiquitin monomers 0.02 Orthogroups_2024-Update
Seita.4G253400.1 No alias UBQ ubiquitin-fold protein 0.05 Orthogroups_2024-Update
Seita.4G265000.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 231 302
IPR000626 Ubiquitin_dom 155 226
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 79 150
IPR000626 Ubiquitin_dom 307 378
No external refs found!