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At3g54230


Description : suppressor of abi3-5 [Source:TAIR;Acc:AT3G54230]


Gene families : OG_42_0005327 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005327_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g54230
Cluster HCCA clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Mp1g04870.1 No alias SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000467 G_patch_dom 929 970
IPR000504 RRM_dom 274 344
IPR000504 RRM_dom 434 499
No external refs found!