Sobic.004G057700.1


Description : PLATZ-type transcription factor


Gene families : OG_42_0000211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G057700.1
Cluster HCAA Clusters: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
A4A49_05295 No alias hypothetical protein 0.02 Orthogroups_2024-Update
At1g43000 No alias PLATZ transcription factor family protein... 0.04 Orthogroups_2024-Update
At1g76590 No alias At1g76590 [Source:UniProtKB/TrEMBL;Acc:Q2HIW3] 0.03 Orthogroups_2024-Update
Bradi1g35697 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
Brara.G00556.1 No alias PLATZ-type transcription factor 0.04 Orthogroups_2024-Update
Brara.G01074.1 No alias PLATZ-type transcription factor 0.06 Orthogroups_2024-Update
Brara.G02180.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I02755.1 No alias PLATZ-type transcription factor 0.02 Orthogroups_2024-Update
HORVU1Hr1G050480.1 No alias PLATZ-type transcription factor 0.05 Orthogroups_2024-Update
LOC_Os04g50120 No alias zinc-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g41930 No alias zinc-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00002134-RA No alias (at1g76590 : 113.0) PLATZ transcription factor family... 0.03 Orthogroups_2024-Update
PSME_00008672-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00042053-RA No alias (at1g32700 : 237.0) PLATZ transcription factor family... 0.03 Orthogroups_2024-Update
Potri.014G059300 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Pp1s560_1V6 No alias zinc ion binding 0.03 Orthogroups_2024-Update
Sobic.006G197800.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Sopen12g005480 No alias PLATZ transcription factor 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006734 DUF597 60 131
No external refs found!