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Description : RlmI-type rRNA methyltransferase
Gene families : OG_42_0007634 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007634_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor: Sobic.004G058400.1 | |
| Cluster | HCAA Clusters: Cluster_144 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Glyma.08G234700 | No alias | S-adenosyl-L-methionine-dependent methyltransferases... | 0.03 | Orthogroups_2024-Update | |
| Seita.1G069700.1 | No alias | RlmI-type rRNA methyltransferase | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008168 | methyltransferase activity | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000120 | RNA polymerase I transcription factor complex | IEP | Predicted GO |
| MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | Predicted GO |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Predicted GO |
| MF | GO:0004418 | hydroxymethylbilane synthase activity | IEP | Predicted GO |
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
| MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
| MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Predicted GO |
| CC | GO:0005667 | transcription factor complex | IEP | Predicted GO |
| BP | GO:0006360 | transcription by RNA polymerase I | IEP | Predicted GO |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predicted GO |
| MF | GO:0008565 | protein transporter activity | IEP | Predicted GO |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Predicted GO |
| MF | GO:0009678 | hydrogen-translocating pyrophosphatase activity | IEP | Predicted GO |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | Predicted GO |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Predicted GO |
| MF | GO:0032977 | membrane insertase activity | IEP | Predicted GO |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predicted GO |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predicted GO |
| MF | GO:0034061 | DNA polymerase activity | IEP | Predicted GO |
| MF | GO:0042802 | identical protein binding | IEP | Predicted GO |
| MF | GO:0042803 | protein homodimerization activity | IEP | Predicted GO |
| BP | GO:0043631 | RNA polyadenylation | IEP | Predicted GO |
| CC | GO:0044452 | nucleolar part | IEP | Predicted GO |
| CC | GO:0044798 | nuclear transcription factor complex | IEP | Predicted GO |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
| MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
| MF | GO:0060590 | ATPase regulator activity | IEP | Predicted GO |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Predicted GO |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
| CC | GO:1990204 | oxidoreductase complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019614 | SAM-dep_methyl-trfase | 245 | 422 |
| No external refs found! |