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  5. Sobic.004G060700.1

Sobic.004G060700.1


Description : Unknown function


Gene families : OG_42_0000301 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G060700.1
Cluster HCAA Clusters: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
Bradi2g47121 No alias fatty acid reductase 4 0.03 Orthogroups_2024-Update
Brara.B00974.1 No alias fatty acyl CoA reductase *(FAR) 0.03 Orthogroups_2024-Update
Brara.G01705.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G036217 No alias Jojoba acyl CoA reductase-related male sterility protein 0.02 Orthogroups_2024-Update
Potri.009G145000 No alias Jojoba acyl CoA reductase-related male sterility protein 0.02 Orthogroups_2024-Update
Solyc03g051960 No alias Fatty acyl-CoA reductase (AHRD V3.3 *** K4BGJ7_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
InterPro domains Description Start Stop
IPR013120 Male_sterile_NAD-bd 20 322
IPR033640 FAR_C 416 493
No external refs found!