1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.004G061800.1

Sobic.004G061800.1


Description : rRNA adenosine dimethylase *(DIM1A)


Gene families : OG_42_0002699 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002699_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G061800.1
Cluster HCAA Clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
A4A49_07072 No alias ribosomal rna small subunit methyltransferase 0.03 Orthogroups_2024-Update
Bradi3g15000 No alias Ribosomal RNA adenine dimethylase family protein 0.05 Orthogroups_2024-Update
Brara.E00053.1 No alias rRNA adenosine dimethylase *(DIM1A) 0.04 Orthogroups_2024-Update
Cre01.g042900 No alias Ribosomal RNA adenine dimethylase family protein 0.09 Orthogroups_2024-Update
GRMZM2G136599 No alias Ribosomal RNA adenine dimethylase family protein 0.06 Orthogroups_2024-Update
Glyma.06G315500 No alias Ribosomal RNA adenine dimethylase family protein 0.03 Orthogroups_2024-Update
Mp6g10100.1 No alias rRNA adenosine dimethylase (DIM1A) 0.02 Orthogroups_2024-Update
Potri.014G121200 No alias Ribosomal RNA adenine dimethylase family protein 0.03 Orthogroups_2024-Update
Solyc01g100430 No alias rRNA adenine N(6)-methyltransferase (AHRD V3.3 *** K4B177_SOLLC) 0.03 Orthogroups_2024-Update
evm.model.tig00021348.95 No alias (at2g47420 : 310.0) Ribosomal RNA adenine dimethylase... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
BP GO:0009092 homoserine metabolic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
BP GO:0019346 transsulfuration IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0050667 homocysteine metabolic process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001737 KsgA/Erm 31 258
No external refs found!