At3g54320

Description : Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT3G54320]

Gene families : OG_42_0000060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At3g54320
Cluster	HCCA clusters: Cluster_59

Target	Alias	Description	ECC score	Gene Family Method
A4A49_19373	No alias	ethylene-responsive transcription factor rap2-7	0.03	Orthogroups_2024-Update
At1g16060	No alias	AP2-like ethylene-responsive transcription factor...	0.03	Orthogroups_2024-Update
Bradi2g48130	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G141219	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.12G056300	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.13G038150	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
LOC_Os05g32270	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g44750	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os11g19060	No alias	BABY BOOM 1, putative, expressed	0.02	Orthogroups_2024-Update
Sobic.010G202700.2	No alias	AP2-type transcription factor *(WRI/AIL)	0.04	Orthogroups_2024-Update
Solyc01g096860	No alias	AP2-like ethylene-responsive transcription factor (AHRD...	0.02	Orthogroups_2024-Update
Solyc03g044300	No alias	APETALA2a	0.03	Orthogroups_2024-Update
Solyc06g068570	No alias	AP2-like ethylene-responsive transcription factor	0.02	Orthogroups_2024-Update
Sopen11g005510	No alias	hypothetical protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	166	217
IPR001471	AP2/ERF_dom	65	123

External Links

No external refs found!