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  5. Sobic.004G070900.1

Sobic.004G070900.1


Description : MYB class-R2R3 subgroup-22/23 transcription factor


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G070900.1
Cluster HCAA Clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
At5g17800 No alias Transcription factor MYB56... 0.03 Orthogroups_2024-Update
Glyma.04G184200 No alias myb domain protein 98 0.04 Orthogroups_2024-Update
Glyma.05G038500 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
Glyma.07G228700 No alias myb domain protein 105 0.03 Orthogroups_2024-Update
Glyma.17G245200 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Glyma.19G062000 No alias myb domain protein 98 0.05 Orthogroups_2024-Update
HORVU4Hr1G077230.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g09480 No alias myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os09g01960 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00006895-RA No alias (at1g22640 : 178.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
Potri.001G347200 No alias myb domain protein 118 0.02 Orthogroups_2024-Update
Potri.005G186400 No alias myb domain protein 52 0.03 Orthogroups_2024-Update
Potri.007G106100 No alias myb domain protein 69 0.03 Orthogroups_2024-Update
Potri.012G082000 No alias myb domain protein 98 0.02 Orthogroups_2024-Update
Potri.015G033600 No alias myb domain protein 52 0.02 Orthogroups_2024-Update
Pp1s10_267V6 No alias r2r3-myb transcription factor 0.03 Orthogroups_2024-Update
Solyc08g080580 No alias Myb (AHRD V3.3 *** Q948S4_TOBAC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 64 107
IPR001005 SANT/Myb 12 58
No external refs found!