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  5. Sobic.004G072000.1

Sobic.004G072000.1


Description : component *(bS21c) of small plastid ribosomal-subunit proteome


Gene families : OG_42_0003775 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003775_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G072000.1
Cluster HCAA Clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
444102 No alias Ribosomal protein S21 family protein 0.02 Orthogroups_2024-Update
A4A49_30880 No alias hypothetical protein 0.07 Orthogroups_2024-Update
Brara.B03274.1 No alias component *(bS21c) of small plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Cre01.g017300 No alias Function unknown 0.05 Orthogroups_2024-Update
Glyma.19G071300 No alias Ribosomal protein S21 family protein 0.06 Orthogroups_2024-Update
Glyma.19G090000 No alias Ribosomal protein S21 family protein 0.04 Orthogroups_2024-Update
Mp4g21580.1 No alias component mtRPS21|psRPS21 of mitochondrial ribosome... 0.02 Orthogroups_2024-Update
Potri.001G331600 No alias Ribosomal protein S21 family protein 0.02 Orthogroups_2024-Update
Pp1s241_34V6 No alias 30s ribosomal protein s21 0.03 Orthogroups_2024-Update
Seita.1G056700.1 No alias component *(bS21c) of small plastid ribosomal-subunit proteome 0.13 Orthogroups_2024-Update
Sopen02g017200 No alias Ribosomal protein S21 0.02 Orthogroups_2024-Update
evm.model.tig00000863.30 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
InterPro domains Description Start Stop
IPR001911 Ribosomal_S21 49 103
No external refs found!