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  5. At3g54580

At3g54580


Description : Proline-rich extensin-like family protein [Source:UniProtKB/TrEMBL;Acc:F4JCZ1]


Gene families : OG_42_0042417 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g54580
Cluster HCCA clusters: Cluster_185


Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEA InterProScan predictions
BP GO:0009664 plant-type cell wall organization IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005747 mitochondrial respiratory chain complex I IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
CC GO:0030964 NADH dehydrogenase complex IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0045271 respiratory chain complex I IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006706 Extensin_dom 406 455
IPR006706 Extensin_dom 864 913
IPR006706 Extensin_dom 281 330
IPR006706 Extensin_dom 331 380
IPR006706 Extensin_dom 256 305
IPR006706 Extensin_dom 839 888
IPR006706 Extensin_dom 181 230
IPR006706 Extensin_dom 156 205
IPR006706 Extensin_dom 81 130
IPR006706 Extensin_dom 723 772
IPR006706 Extensin_dom 356 405
IPR006706 Extensin_dom 59 105
IPR006706 Extensin_dom 597 646
IPR006706 Extensin_dom 456 505
IPR006706 Extensin_dom 106 155
IPR006706 Extensin_dom 131 180
IPR006706 Extensin_dom 481 530
IPR006706 Extensin_dom 381 430
IPR006706 Extensin_dom 814 863
IPR006706 Extensin_dom 431 480
IPR006706 Extensin_dom 506 555
IPR006706 Extensin_dom 806 838
IPR006706 Extensin_dom 622 671
IPR006706 Extensin_dom 584 621
IPR006706 Extensin_dom 231 280
IPR006706 Extensin_dom 889 938
IPR006706 Extensin_dom 548 596
IPR006706 Extensin_dom 306 355
IPR006706 Extensin_dom 765 813
IPR006706 Extensin_dom 206 255
No external refs found!