Sobic.004G086800.1

Description : 3-ketoacyl-CoA synthase *(KCS)

Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.004G086800.1
Cluster	HCAA Clusters: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method
A4A49_04047	No alias	3-ketoacyl-coa synthase 6	0.03	Orthogroups_2024-Update
A4A49_08035	No alias	3-ketoacyl-coa synthase 20	0.03	Orthogroups_2024-Update
Brara.C04403.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
Brara.I04736.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
Brara.J00238.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
Brara.J02699.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.04	Orthogroups_2024-Update
GRMZM2G569948	No alias	3-ketoacyl-CoA synthase 11	0.04	Orthogroups_2024-Update
Glyma.10G241700	No alias	3-ketoacyl-CoA synthase 6	0.03	Orthogroups_2024-Update
HORVU6Hr1G004830.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
HORVU6Hr1G036950.4	No alias	3-ketoacyl-CoA synthase *(KCS)	0.02	Orthogroups_2024-Update
LOC_Os05g49290	No alias	3-ketoacyl-CoA synthase, putative, expressed	0.02	Orthogroups_2024-Update
Potri.018G032200	No alias	3-ketoacyl-CoA synthase 11	0.02	Orthogroups_2024-Update
Pp1s28_28V6	No alias	beta-ketoacyl-coa synthase family protein	0.03	Orthogroups_2024-Update
Seita.5G187600.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
Seita.9G285300.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
Sobic.002G179700.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.04	Orthogroups_2024-Update
Sobic.009G241000.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEA	16Dec
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Predicted GO
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
BP	GO:0009889	regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0010468	regulation of gene expression	IEP	Predicted GO
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0019222	regulation of metabolic process	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
BP	GO:0031323	regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
BP	GO:0050789	regulation of biological process	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predicted GO
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO
BP	GO:0080090	regulation of primary metabolic process	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013601	FAE1_typ3_polyketide_synth	103	392
IPR013747	ACP_syn_III_C	410	490

External Links

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Sobic.004G086800.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation