1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.004G087700.1

Sobic.004G087700.1


Description : subfamily ABCG transporter


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G087700.1
Cluster HCAA Clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
A4A49_00289 No alias abc transporter g family member 32 0.02 Orthogroups_2024-Update
A4A49_09052 No alias pleiotropic drug resistance protein 1 0.02 Orthogroups_2024-Update
A4A49_24419 No alias pleiotropic drug resistance protein 3 0.02 Orthogroups_2024-Update
At2g36380 No alias ABC transporter G family member 34... 0.05 Orthogroups_2024-Update
Bradi1g26040 No alias pleiotropic drug resistance 6 0.05 Orthogroups_2024-Update
Bradi1g35680 No alias pleiotropic drug resistance 12 0.06 Orthogroups_2024-Update
Bradi2g10110 No alias pleiotropic drug resistance 12 0.05 Orthogroups_2024-Update
Bradi2g43150 No alias pleiotropic drug resistance 12 0.05 Orthogroups_2024-Update
Brara.G02000.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Brara.H02545.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
GRMZM2G143139 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Glyma.03G192600 No alias pleiotropic drug resistance 6 0.03 Orthogroups_2024-Update
Glyma.03G192700 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
Glyma.17G206100 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.19G169400 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
HORVU3Hr1G071470.1 No alias subfamily ABCG transporter 0.06 Orthogroups_2024-Update
LOC_Os01g42410 No alias pleiotropic drug resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g16449 No alias pleiotropic drug resistance protein 4, putative, expressed 0.03 Orthogroups_2024-Update
MA_10430834g0010 No alias (at1g59870 : 357.0) ATP binding cassette transporter.... 0.04 Orthogroups_2024-Update
Mp1g25350.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
PSME_00000869-RA No alias (q5z9s8|pdr12_orysa : 1879.0) Pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00001761-RA No alias (q5z9s8|pdr12_orysa : 1822.0) Pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00005403-RA No alias (q8gu88|pdr7_orysa : 1833.0) Putative pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00013320-RA No alias (q8gu88|pdr7_orysa : 1886.0) Putative pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00014724-RA No alias (q76cu2|pdr1_tobac : 1860.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
PSME_00015395-RA No alias (q76cu2|pdr1_tobac : 1904.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
PSME_00015447-RA No alias (at1g15210 : 1560.0) pleiotropic drug resistance 7... 0.03 Orthogroups_2024-Update
PSME_00037776-RA No alias (at1g59870 : 665.0) ATP binding cassette transporter.... 0.05 Orthogroups_2024-Update
Potri.001G049000 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Seita.1G041000.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Seita.5G221500.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Seita.9G304200.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Sobic.002G321300.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Sobic.003G216166.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Solyc09g091660 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005795 Golgi stack IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0031984 organelle subcompartment IEP Predicted GO
BP GO:0034975 protein folding in endoplasmic reticulum IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
CC GO:0098791 Golgi subcompartment IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR029481 ABC_trans_N 95 146
IPR013525 ABC_2_trans 506 718
IPR013525 ABC_2_trans 1169 1383
IPR003439 ABC_transporter-like 872 1024
IPR003439 ABC_transporter-like 171 352
IPR013581 PDR_assoc 723 788
No external refs found!