Description : pectate lyase & EC_4.2 carbon-oxygen lyase
Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Sorghum bicolor: Sobic.004G091000.1 | |
Cluster | HCAA Clusters: Cluster_273 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_12542 | No alias | pectate lyase | 0.03 | Orthogroups_2024-Update | |
A4A49_35755 | No alias | putative pectate lyase p59 | 0.03 | Orthogroups_2024-Update | |
Brara.I00410.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
GRMZM2G323418 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.13G145900 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.18G255900 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G075970.2 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.04 | Orthogroups_2024-Update | |
MA_203992g0010 | No alias | (at4g24780 : 544.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
PSME_00000524-RA | No alias | (at4g24780 : 590.0) Pectin lyase-like superfamily... | 0.02 | Orthogroups_2024-Update | |
PSME_00009672-RA | No alias | (at5g48900 : 608.0) Pectin lyase-like superfamily... | 0.02 | Orthogroups_2024-Update | |
PSME_00017512-RA | No alias | (at4g24780 : 545.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
Potri.001G052300 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.003G175900 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.008G182200 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
Potri.011G008100 | No alias | root hair specific 14 | 0.02 | Orthogroups_2024-Update | |
Potri.014G178100 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.015G064700 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
Potri.015G087800 | No alias | Pectin lyase-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
Pp1s173_162V6 | No alias | pectate lyase | 0.02 | Orthogroups_2024-Update | |
Pp1s409_2V6 | No alias | pectate lyase | 0.02 | Orthogroups_2024-Update | |
Pp1s84_82V6 | No alias | pectate lyase | 0.02 | Orthogroups_2024-Update | |
Seita.4G230900.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.04 | Orthogroups_2024-Update | |
Seita.9G233400.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.01 | Orthogroups_2024-Update | |
Solyc02g067450 | No alias | Pectate lyase (AHRD V3.3 *** M1A9L8_SOLTU) | 0.03 | Orthogroups_2024-Update | |
Solyc03g058890 | No alias | Pectate lyase (AHRD V3.3 *** K4BGT7_SOLLC) | 0.03 | Orthogroups_2024-Update | |
Solyc03g111690 | No alias | Pectate lyase family protein (AHRD V3.3 *** AT1G67750.1) | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030570 | pectate lyase activity | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004857 | enzyme inhibitor activity | IEP | Predicted GO |
BP | GO:0010215 | cellulose microfibril organization | IEP | Predicted GO |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015297 | antiporter activity | IEP | Predicted GO |
BP | GO:0030198 | extracellular matrix organization | IEP | Predicted GO |
MF | GO:0030234 | enzyme regulator activity | IEP | Predicted GO |
BP | GO:0043062 | extracellular structure organization | IEP | Predicted GO |
MF | GO:0098772 | molecular function regulator | IEP | Predicted GO |
No external refs found! |