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Description : deacetylase component *(HDA19) of SNL-HDA19 histone deacetylase complex & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & histone deacetylase *(HDA8)
Gene families : OG_42_0000706 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000706_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor: Sobic.004G091200.1 | |
| Cluster | HCAA Clusters: Cluster_31 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_16800 | No alias | histone deacetylase 19 | 0.03 | Orthogroups_2024-Update | |
| Cre06.g277350 | No alias | histone deacetylase 1 | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G072600.11 | No alias | histone deacetylase *(HDA8) | 0.04 | Orthogroups_2024-Update | |
| HORVU6Hr1G038010.1 | No alias | deacetylase component *(HDA19) of SNL-HDA19 histone... | 0.03 | Orthogroups_2024-Update | |
| evm.model.tig00001307.14 | No alias | (at3g44680 : 270.0) Class I RPD3 type protein; histone... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005096 | GTPase activator activity | IEP | Predicted GO |
| MF | GO:0005543 | phospholipid binding | IEP | Predicted GO |
| BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Predicted GO |
| BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Predicted GO |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Predicted GO |
| MF | GO:0008047 | enzyme activator activity | IEP | Predicted GO |
| MF | GO:0008289 | lipid binding | IEP | Predicted GO |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015405 | P-P-bond-hydrolysis-driven transmembrane transporter activity | IEP | Predicted GO |
| CC | GO:0016469 | proton-transporting two-sector ATPase complex | IEP | Predicted GO |
| CC | GO:0016471 | vacuolar proton-transporting V-type ATPase complex | IEP | Predicted GO |
| BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
| BP | GO:0016570 | histone modification | IEP | Predicted GO |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Predicted GO |
| MF | GO:0019829 | cation-transporting ATPase activity | IEP | Predicted GO |
| MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0030695 | GTPase regulator activity | IEP | Predicted GO |
| CC | GO:0033176 | proton-transporting V-type ATPase complex | IEP | Predicted GO |
| MF | GO:0036442 | proton-exporting ATPase activity | IEP | Predicted GO |
| MF | GO:0042625 | ATPase coupled ion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEP | Predicted GO |
| MF | GO:0043492 | ATPase activity, coupled to movement of substances | IEP | Predicted GO |
| CC | GO:0044437 | vacuolar part | IEP | Predicted GO |
| MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | Predicted GO |
| MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | Predicted GO |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023801 | His_deacetylse_dom | 42 | 329 |
| No external refs found! |