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  5. Sobic.004G092800.1

Sobic.004G092800.1


Description : Unknown function


Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G092800.1
Cluster HCAA Clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
A4A49_36429 No alias 17.3 kda class ii heat shock protein 0.04 Orthogroups_2024-Update
Bradi2g05374 No alias 17.6 kDa class II heat shock protein 0.03 Orthogroups_2024-Update
Bradi2g12990 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Brara.B01077.1 No alias class-C-I small heat-shock-responsive protein 0.04 Orthogroups_2024-Update
Brara.C00497.1 No alias class-C-II small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Brara.J02182.1 No alias class-C-II small heat-shock-responsive protein 0.02 Orthogroups_2024-Update
GRMZM2G046382 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G083810 No alias 17.6 kDa class II heat shock protein 0.02 Orthogroups_2024-Update
GRMZM2G098167 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G106800 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
Glyma.04G054400 No alias 17.6 kDa class II heat shock protein 0.03 Orthogroups_2024-Update
Glyma.04G208000 No alias HSP20-like chaperones superfamily protein 0.05 Orthogroups_2024-Update
Glyma.06G054700 No alias 17.6 kDa class II heat shock protein 0.03 Orthogroups_2024-Update
Glyma.07G200200 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G176300 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G176500 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G099900 No alias 17.6 kDa class II heat shock protein 0.03 Orthogroups_2024-Update
Glyma.19G011400 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G015900 No alias 17.6 kDa class II heat shock protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G020390.1 No alias class-C-II small heat-shock-responsive protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G020490.3 No alias class-C-II small heat-shock-responsive protein 0.02 Orthogroups_2024-Update
Kfl00404_0080 kfl00404_0080_v1.1 (at1g53540 : 122.0) HSP20-like chaperones superfamily... 0.02 Orthogroups_2024-Update
LOC_Os01g08860 No alias hsp20/alpha crystallin family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g15960 No alias hsp20/alpha crystallin family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_24774g0010 No alias (at5g59720 : 211.0) encodes a low molecular weight heat... 0.02 Orthogroups_2024-Update
PSME_00005053-RA No alias (p19242|hsp21_pea : 166.0) 17.1 kDa class II heat shock... 0.04 Orthogroups_2024-Update
PSME_00005054-RA No alias (p19242|hsp21_pea : 161.0) 17.1 kDa class II heat shock... 0.03 Orthogroups_2024-Update
PSME_00016583-RA No alias (p19242|hsp21_pea : 135.0) 17.1 kDa class II heat shock... 0.02 Orthogroups_2024-Update
PSME_00021206-RA No alias (p19242|hsp21_pea : 115.0) 17.1 kDa class II heat shock... 0.03 Orthogroups_2024-Update
PSME_00021602-RA No alias (p19242|hsp21_pea : 160.0) 17.1 kDa class II heat shock... 0.02 Orthogroups_2024-Update
PSME_00023198-RA No alias (at5g59720 : 222.0) encodes a low molecular weight heat... 0.04 Orthogroups_2024-Update
PSME_00023200-RA No alias (at5g59720 : 194.0) encodes a low molecular weight heat... 0.04 Orthogroups_2024-Update
PSME_00042165-RA No alias (p19244|hsp41_pea : 162.0) 22.7 kDa class IV heat shock... 0.03 Orthogroups_2024-Update
PSME_00055686-RA No alias (p19243|hsp11_pea : 110.0) 18.1 kDa class I heat shock... 0.03 Orthogroups_2024-Update
Potri.003G071100 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G039200 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Pp1s148_10V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s372_62V6 No alias 18.5 kDa class I heat shock protein (HSP 18.5) [Glycine max] 0.05 Orthogroups_2024-Update
Pp1s85_11V6 No alias 18.5 kDa class I heat shock protein (HSP 18.5) [Glycine max] 0.03 Orthogroups_2024-Update
Pp1s8_244V6 No alias F12M12.200; 17.4 kDa class I heat shock protein... 0.02 Orthogroups_2024-Update
Pp1s8_86V6 No alias 17.4 kDa class I heat shock protein (HSP 17.4)... 0.02 Orthogroups_2024-Update
Seita.5G092800.1 No alias class-C-I small heat-shock-responsive protein 0.05 Orthogroups_2024-Update
Sobic.004G026300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen06g032930 No alias Hsp20/alpha crystallin family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 59 175
No external refs found!