Sobic.004G094000.1

Description : cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase acting on CH-NH group of donor

Gene families : OG_42_0000398 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000398_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.004G094000.1
Cluster	HCAA Clusters: Cluster_262

Target	Alias	Description	ECC score	Gene Family Method
Brara.B00939.1	No alias	cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase...	0.03	Orthogroups_2024-Update
Brara.I01123.1	No alias	cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase...	0.03	Orthogroups_2024-Update
GRMZM2G167220	No alias	cytokinin oxidase/dehydrogenase 1	0.02	Orthogroups_2024-Update
Glyma.04G055600	No alias	cytokinin oxidase 7	0.03	Orthogroups_2024-Update
HORVU2Hr1G090140.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
LOC_Os01g09260	No alias	cytokinin dehydrogenase precursor, putative, expressed	0.02	Orthogroups_2024-Update
Solyc12g008900	No alias	cytokinin oxidase6	0.03	Orthogroups_2024-Update
Sopen10g006890	No alias	FAD binding domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009690	cytokinin metabolic process	IEA	16Dec
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	None	Extended
MF	GO:0019139	cytokinin dehydrogenase activity	IEA	16Dec
BP	GO:0034754	cellular hormone metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	16Dec
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	Predicted GO
BP	GO:0001510	RNA methylation	IEP	Predicted GO
MF	GO:0008134	transcription factor binding	IEP	Predicted GO
MF	GO:0008170	N-methyltransferase activity	IEP	Predicted GO
MF	GO:0008649	rRNA methyltransferase activity	IEP	Predicted GO
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Predicted GO
MF	GO:0016436	rRNA (uridine) methyltransferase activity	IEP	Predicted GO
MF	GO:0017025	TBP-class protein binding	IEP	Predicted GO
BP	GO:0031167	rRNA methylation	IEP	Predicted GO
MF	GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	IEP	Predicted GO
BP	GO:0070475	rRNA base methylation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR015345	Cytokinin_DH_FAD/cytokin-bd	244	522
IPR006094	Oxid_FAD_bind_N	66	212

External Links

No external refs found!

Sobic.004G094000.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation