1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.004G098100.1

Sobic.004G098100.1


Description : Unknown function


Gene families : OG_42_0000415 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000415_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G098100.1
Cluster HCAA Clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G337191 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.01G006000 No alias oxidative stress 3 0.05 Orthogroups_2024-Update
Glyma.05G225900 No alias oxidative stress 3 0.04 Orthogroups_2024-Update
Glyma.06G077200 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.07G125600 No alias oxidative stress 3 0.03 Orthogroups_2024-Update
Glyma.08G032800 No alias oxidative stress 3 0.03 Orthogroups_2024-Update
Glyma.11G208700 No alias oxidative stress 3 0.03 Orthogroups_2024-Update
Glyma.14G098200 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.17G226500 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.18G045200 No alias oxidative stress 3 0.05 Orthogroups_2024-Update
Sopen03g005760 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen03g039920 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen06g024710 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen08g022630 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!