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  5. Sobic.004G100700.1

Sobic.004G100700.1


Description : subgroup ERF-III transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G100700.1
Cluster HCAA Clusters: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
92334 No alias Integrase-type DNA-binding superfamily protein 0.06 Orthogroups_2024-Update
A4A49_03202 No alias ethylene-responsive transcription factor erf053 0.02 Orthogroups_2024-Update
At3g60490 No alias Ethylene-responsive transcription factor ERF035... 0.04 Orthogroups_2024-Update
Bradi2g56145 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Brara.B02302.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Brara.E00692.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.02 Orthogroups_2024-Update
Brara.I04678.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Brara.J02528.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G080516 No alias ethylene responsive element binding factor 1 0.03 Orthogroups_2024-Update
GRMZM2G174917 No alias DREB and EAR motif protein 3 0.03 Orthogroups_2024-Update
GRMZM2G301860 No alias DREB and EAR motif protein 3 0.03 Orthogroups_2024-Update
GRMZM5G816314 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G231200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G039300 No alias DORNROSCHEN-like 0.02 Orthogroups_2024-Update
Glyma.03G162700 No alias ethylene-responsive element binding factor 15 0.03 Orthogroups_2024-Update
Glyma.04G251400 No alias Integrase-type DNA-binding superfamily protein 0.06 Orthogroups_2024-Update
Glyma.07G250100 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G233800 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G152000 No alias C-repeat-binding factor 4 0.02 Orthogroups_2024-Update
Glyma.18G252400 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.19G192400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G253100 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
LOC_Os02g45420 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g29810 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g40150 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_100577g0010 No alias (at5g21960 : 112.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_108992g0010 No alias (at1g74930 : 121.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_184464g0010 No alias (at4g17500 : 88.2) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
MA_426919g0010 No alias (at1g19210 : 109.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_463250g0010 No alias (at5g11590 : 121.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_54341g0010 No alias (at1g15360 : 131.0) Encodes a member of the ERF... 0.02 Orthogroups_2024-Update
MA_8574268g0010 No alias (at5g11590 : 123.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Mp6g08690.1 No alias transcription factor (DREB) 0.03 Orthogroups_2024-Update
PSME_00005183-RA No alias (at5g47220 : 92.8) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
Potri.001G154200 No alias ethylene responsive element binding factor 5 0.02 Orthogroups_2024-Update
Potri.003G079300 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.017G087800 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Pp1s105_212V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s15_186V6 No alias transcriptional factor 0.04 Orthogroups_2024-Update
Pp1s276_3V6 No alias transcriptional factor 0.03 Orthogroups_2024-Update
Seita.2G390000.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Seita.4G180800.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Seita.8G098100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G298100.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G058732.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G168200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc06g068830 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc08g081960 No alias Solanum Lycopersicum Cytokinin Response Factor 2 0.03 Orthogroups_2024-Update
Solyc11g042560 No alias Ethylene-responsive transcription factor ERF021 family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 53 101
No external refs found!