Sobic.004G101400.1

Description : HSF-type transcription factor

Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.004G101400.1
Cluster	HCAA Clusters: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method
A4A49_05282	No alias	heat stress transcription factor a-8	0.04	Orthogroups_2024-Update
Bradi1g05550	No alias	heat shock transcription factor A6B	0.03	Orthogroups_2024-Update
Brara.A00901.1	No alias	transcriptional regulator *(HsfA1) & HSF-type...	0.03	Orthogroups_2024-Update
Brara.G00630.1	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
Brara.H00586.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.10G029600	No alias	heat shock transcription factor A6B	0.03	Orthogroups_2024-Update
Glyma.11G009800	No alias	heat shock factor 3	0.02	Orthogroups_2024-Update
Glyma.17G241300	No alias	heat shock transcription factor B4	0.03	Orthogroups_2024-Update
HORVU2Hr1G095320.2	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
HORVU4Hr1G073650.2	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
HORVU7Hr1G056820.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os02g13800	No alias	HSF-type DNA-binding domain containing protein, expressed	0.09	Orthogroups_2024-Update
LOC_Os03g06630	No alias	heat stress transcription factor, putative, expressed	0.03	Orthogroups_2024-Update
Seita.1G025800.1	No alias	HSF-type transcription factor	0.1	Orthogroups_2024-Update
Sopen03g004850	No alias	HSF-type DNA-binding	0.04	Orthogroups_2024-Update
Sopen07g019390	No alias	HSF-type DNA-binding	0.04	Orthogroups_2024-Update
Sopen07g029070	No alias	HSF-type DNA-binding	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Predicted GO
MF	GO:0004564	beta-fructofuranosidase activity	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016161	beta-amylase activity	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	22	111

External Links

No external refs found!

Sobic.004G101400.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation