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  5. Sobic.004G106300.1

Sobic.004G106300.1


Description : transcription factor *(CLAUSA)


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G106300.1
Cluster HCAA Clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
405704 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
442062 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
A4A49_36129 No alias protein phosphate starvation response 1 0.03 Orthogroups_2024-Update
At2g02060 No alias Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887] 0.03 Orthogroups_2024-Update
At5g42630 No alias Probable transcription factor KAN4... 0.03 Orthogroups_2024-Update
Bradi5g18590 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Brara.A00897.1 No alias KANADI-type transcription factor 0.02 Orthogroups_2024-Update
Brara.D02442.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Brara.E00559.1 No alias transcription factor *(CLAUSA) 0.04 Orthogroups_2024-Update
Brara.F03679.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Brara.H00915.1 No alias KANADI-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G069525 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.06G035700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G089100 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G019260.2 No alias GARP subgroup PHL transcription factor & transcription... 0.03 Orthogroups_2024-Update
LOC_Os03g21240 No alias myb-like DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g55760 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10251997g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_1432g0010 No alias (at3g13040 : 86.3) myb-like HTH transcriptional... 0.02 Orthogroups_2024-Update
MA_52379g0010 No alias (at2g40260 : 115.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
Potri.001G133400 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.001G280000 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Potri.006G000800 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Potri.015G031600 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.019G032700 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s112_141V6 No alias transfactor-like protein 0.02 Orthogroups_2024-Update
Pp1s33_139V6 No alias myb family transcription factor 0.02 Orthogroups_2024-Update
Pp1s490_9V6 No alias myb-cc type transfactor 0.04 Orthogroups_2024-Update
Pp1s55_182V6 No alias T3G21.3; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s68_240V6 No alias myb-cc type transfactor 0.03 Orthogroups_2024-Update
Pp1s68_248V6 No alias myb transcription factor 0.04 Orthogroups_2024-Update
Pp1s73_118V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s8_227V6 No alias T3G21.3; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.6G053400.1 No alias KANADI-type transcription factor 0.04 Orthogroups_2024-Update
Solyc06g008200 No alias Myb-like transcription factor family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen04g020720 No alias MYB-CC type transfactor, LHEQLE motif 0.03 Orthogroups_2024-Update
Sopen06g021670 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 123 173
No external refs found!