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  5. Sobic.004G108400.1

Sobic.004G108400.1


Description : Unknown function


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G108400.1
Cluster HCAA Clusters: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
A4A49_41231 No alias heavy metal-associated isoprenylated plant protein 21 0.04 Orthogroups_2024-Update
At4g35060 No alias HIPP25 [Source:UniProtKB/TrEMBL;Acc:A0A178V323] 0.06 Orthogroups_2024-Update
Brara.C00171.1 No alias copper chaperone *(ATX/CCH) 0.04 Orthogroups_2024-Update
Glyma.02G160500 No alias copper chaperone 0.03 Orthogroups_2024-Update
Glyma.03G212400 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G238000 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G210500 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G019300 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G112560.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G009000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g06080 No alias heavy metal-associated domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_45640g0010 No alias (at3g56240 : 120.0) CCH protein belongs to a family of... 0.03 Orthogroups_2024-Update
MA_9120066g0010 No alias (at3g56891 : 105.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
Mp2g01820.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
PSME_00020227-RA No alias (at5g27690 : 103.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
PSME_00026105-RA No alias (at1g71050 : 114.0) Heavy metal transport/detoxification... 0.02 Orthogroups_2024-Update
PSME_00054431-RA No alias (at2g18196 : 111.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
Potri.005G079800 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
Potri.007G087300 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
Seita.5G178800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G324300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G208100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g105000 No alias Heavy metal transport/detoxification superfamily protein... 0.02 Orthogroups_2024-Update
Solyc04g072700 No alias Heavy metal transport/detoxification superfamily protein... 0.04 Orthogroups_2024-Update
Solyc07g055010 No alias Heavy metal transport/detoxification superfamily protein... 0.03 Orthogroups_2024-Update
Sopen11g003110 No alias Heavy-metal-associated domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 14 69
No external refs found!