Sobic.004G112200.1

Description : NAC-type transcription factor

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.004G112200.1
Cluster	HCAA Clusters: Cluster_67

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g24790	No alias	NAC domain containing protein 103	0.02	Orthogroups_2024-Update
Brara.B00960.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E03531.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.J02740.1	No alias	NAC-type transcription factor & regulatory factor...	0.04	Orthogroups_2024-Update
GRMZM5G898290	No alias	NAC domain containing protein 80	0.02	Orthogroups_2024-Update
Glyma.11G075400	No alias	vascular related NAC-domain protein 1	0.04	Orthogroups_2024-Update
Glyma.16G019400	No alias	NAC (No Apical Meristem) domain transcriptional...	0.06	Orthogroups_2024-Update
Glyma.19G024500	No alias	NAC domain containing protein 100	0.02	Orthogroups_2024-Update
LOC_Os02g15340	No alias	no apical meristem protein, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00027653-RA	No alias	(at5g53950 : 285.0) Transcriptional activator of the NAC...	0.03	Orthogroups_2024-Update
PSME_00050582-RA	No alias	(at5g53950 : 267.0) Transcriptional activator of the NAC...	0.03	Orthogroups_2024-Update
PSME_00053123-RA	No alias	(at5g53950 : 278.0) Transcriptional activator of the NAC...	0.02	Orthogroups_2024-Update
Seita.3G003000.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.007G003000.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Solyc03g115850	No alias	NAC domain-containing protein	0.02	Orthogroups_2024-Update
Solyc08g077110	No alias	NAC domain protein, (AHRD V3.3 *** A0A061GAH7_THECC)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Predicted GO
MF	GO:0004252	serine-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004556	alpha-amylase activity	IEP	Predicted GO
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Predicted GO
BP	GO:0006633	fatty acid biosynthetic process	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016790	thiolester hydrolase activity	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
MF	GO:0030247	polysaccharide binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	11	140

External Links

No external refs found!

Sobic.004G112200.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation