Sobic.004G117600.1

Description : WRKY-type transcription factor

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.004G117600.1
Cluster	HCAA Clusters: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
A4A49_37904	No alias	putative wrky transcription factor 12	0.04	Orthogroups_2024-Update
Bradi1g05346	No alias	WRKY DNA-binding protein 39	0.02	Orthogroups_2024-Update
Bradi1g30870	No alias	WRKY DNA-binding protein 18	0.03	Orthogroups_2024-Update
Bradi1g47690	No alias	WRKY family transcription factor family protein	0.03	Orthogroups_2024-Update
Bradi2g05500	No alias	WRKY DNA-binding protein 61	0.02	Orthogroups_2024-Update
Bradi2g11170	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Brara.A03925.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.G02914.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.I02227.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Glyma.04G223300	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
Glyma.07G116300	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.15G003300	No alias	WRKY DNA-binding protein 40	0.04	Orthogroups_2024-Update
HORVU5Hr1G124320.9	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Kfl00096_0150	kfl00096_0150_v1.1	(at1g13960 : 227.0) Encodes WRKY DNA-binding protein 4...	0.02	Orthogroups_2024-Update
MA_2290g0010	No alias	(at5g24110 : 96.3) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00024308-RA	No alias	(at3g01970 : 113.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00025597-RA	No alias	(at1g29280 : 167.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
PSME_00036434-RA	No alias	(at1g62300 : 153.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
PSME_00046716-RA	No alias	(at4g01720 : 148.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00049501-RA	No alias	(at1g62300 : 149.0) Encodes a transcription factor...	0.04	Orthogroups_2024-Update
PSME_00049813-RA	No alias	(at5g13080 : 160.0) WRKY75 is one of several...	0.03	Orthogroups_2024-Update
Potri.001G092900	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Potri.014G164300	No alias	zinc-dependent activator protein-1	0.03	Orthogroups_2024-Update
Seita.2G003100.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Seita.5G032600.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G256700.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.7G301900.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.007G118301.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Solyc03g007380	No alias	WRKY transcription factor 52	0.04	Orthogroups_2024-Update
Solyc04g051690	No alias	WRKY transcription factor 51	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0016567	protein ubiquitination	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
BP	GO:0032446	protein modification by small protein conjugation	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	171	227

External Links

No external refs found!

Sobic.004G117600.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation