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  5. Sobic.004G129800.1

Sobic.004G129800.1


Description : metabolite transporter *(DTX)


Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G129800.1
Cluster HCAA Clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
A4A49_28462 No alias protein detoxification 16 0.02 Orthogroups_2024-Update
A4A49_37068 No alias protein detoxification 2 0.04 Orthogroups_2024-Update
At2g04050 No alias Protein DETOXIFICATION 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIA4] 0.03 Orthogroups_2024-Update
At2g04070 No alias Protein DETOXIFICATION 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIA3] 0.04 Orthogroups_2024-Update
Bradi5g07152 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Brara.F01030.1 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update
Brara.F01918.1 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update
Brara.G00426.1 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update
Brara.H02547.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Brara.J00777.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Glyma.07G099900 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Glyma.07G100100 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
Glyma.10G267700 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Glyma.13G275400 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
Glyma.13G275600 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
LOC_Os04g30490 No alias MATE efflux family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g20450 No alias MATE efflux family protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00034046-RA No alias (at5g52450 : 344.0) MATE efflux family protein;... 0.02 Orthogroups_2024-Update
Pp1s145_130V6 No alias transparent testa 12 0.02 Orthogroups_2024-Update
Seita.9G275000.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Solyc02g063260 No alias Protein DETOXIFICATION (AHRD V3.3 *** K4B6L1_SOLLC) 0.04 Orthogroups_2024-Update
Solyc10g007380 No alias No description available 0.02 Orthogroups_2024-Update
Sopen04g004900 No alias MatE 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0042910 xenobiotic transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 259 420
IPR002528 MATE_fam 38 198
No external refs found!