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  5. Sobic.004G132300.1

Sobic.004G132300.1


Description : Unknown function


Gene families : OG_42_0000260 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000260_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G132300.1
Cluster HCAA Clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Brara.F03271.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.02G039900 No alias Protein of unknown function (DUF707) 0.02 Orthogroups_2024-Update
Glyma.13G244500 No alias Protein of unknown function (DUF707) 0.02 Orthogroups_2024-Update
Glyma.16G001100 No alias Protein of unknown function (DUF707) 0.02 Orthogroups_2024-Update
Potri.009G011000 No alias Protein of unknown function (DUF707) 0.04 Orthogroups_2024-Update
Pp1s63_206V6 No alias at1g11170 t28p6_16 0.02 Orthogroups_2024-Update
Seita.1G134300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G008100.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g093480 No alias lysine ketoglutarate reductase trans-splicing protein... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006897 endocytosis IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0098657 import into cell IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007877 DUF707 101 387
No external refs found!