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  5. Sobic.004G143475.1

Sobic.004G143475.1


Description : Unknown function


Gene families : OG_42_0000864 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G143475.1
Cluster HCAA Clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Brara.H00380.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.H00891.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Pp1s17_376V6 No alias vacuolar protein sorting-associated 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002790 peptide secretion IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0009306 protein secretion IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR031642 VPS13_mid_rpt 574 800
IPR009543 SHR-BD 3242 3557
IPR000008 C2_dom 2619 2723
IPR031646 VPS13_N2 140 380
IPR031645 VPS13_C 3807 3950
IPR026854 VPS13_N 2 115
IPR009291 Vps62 2276 2350
IPR009291 Vps62 1978 2142
No external refs found!